yayınlar

 
  • Ünsal S., Turhan K., Albayrak M., Acar A. C. , Doğan T.,"Learning functional properties of proteins with language models", NATURE MACHINE INTELLIGENCE, cilt.4, ss.227-245, 2022.
  • Tatar Yılmaz G. , Aktar B. S. K.,"Bazı Kalkonların COVID-19 Tedavisine Yönelik SARS-CoV-2 Ana Proteaza Bağlanma Mekanizmasının Moleküler Kenetleme Yaklaşımı ile Aydınlatılması",International journal of advances in engineering and pure sciences (Online), cilt.33, sa.4, ss.660-669, 2021.
  • Tatar G. , Ozyurt E., Turhan K.,"Computational drug repurposing study of the RNA binding domain of SARS-CoV-2 nucleocapsid protein with antiviral agents",Biotechnology Progress, cilt.37, 2021.
  • Tatar G. , Salmanli M., Dogru Y. , Tuzuner T.,"Evaluation of the effects of chlorhexidine and several flavonoids as antiviral purposes on SARS-CoV-2 main protease: molecular docking, molecular dynamics simulation studies.",Journal of biomolecular structure & dynamics, ss.1-10, 2021.
  • TURHAN K. , ÜNSAL S. , Kasap B. , ZİHNİ N. B. , AYDIN KASAP Z. , ACAR A. C.,"DISCOVERY OF METHYLATION BASED IMMUNE-ESCAPE MECHANISMS IN RARE CANCERS",TURKISH JOURNAL OF BIOCHEMISTRY-TÜRK BIYOKIMYA DERGISI, sa.44, ss.30-31, 2019.
  • ALBAYRAK M. , TURHAN K. , Yavuz Y., AYDIN KASAP Z.,"kaphom: An R Package for Testing the Homogeneity of Intra-class Kappa Statistics",COMMUNICATIONS IN STATISTICS-SIMULATION AND COMPUTATION, cilt.2018, ss.1, 2018.
  • KURT B. , NABIYEV V. , TURHAN K.,"AN AUTOMATED COMPUTER-AIDED DETECTION (CADe) AND DIAGNOSIS (CADx) SYSTEM FOR BREAST MICROCALCIFICATIONS IN MAMMOGRAMS",Science and Technology, cilt.6, sa.3, ss.355-376, 2018.
  • Aydin Kasap Z., Kurt B., Turhan K., "Adölesan Dönemde Alkol Tüketimi Risk Faktörlerinin Belirlenmesi ve Risk Tanı Sistemi Modeli", XIX. Ulusal ve II. Uluslararası Biyoistatistik Kongresi, ANTALYA, TÜRKIYE, 25-28 Ekim 2017.
  • Albayrak M., Turhan K., Yavuz Y., Aydin Kasap Z., "İkili Sonuçlu Bağımsız Kappa İstatistiklerinin Homojenlik Testleri İçin Bir R Paketi", XIX. Ulusal ve II. Uluslararası Biyoistatistik Kongresi, ANTALYA, TÜRKIYE, 25-28 Ekim 2017.
  • Aydin Kasap Z., Kurt B., Yavuz Y., Turhan K., Albayrak M., "Selection of Appropriate Agreement Statistic in Binary Diagnostic Tests", 2017 Tıp Teknolojileri Kongresi, TRABZON, TÜRKIYE, 12-14 Ekim 2017.
  • Kasap B., Buruk C.K., Kaklikkaya N., Özkaya E., Aydin Kasap Z., Aydin F., "Kronik hepatitis B virüsü (HBV) enfeksiyonu olan ve HBV’ye karşı doğal bağışık bireylerde Stimulator of Interferon Genes (STING) ekspresyon düzeylerinin araştırılması ", 4. Ulusal Klinik Mikrobiyoloji Kongresi, ANTALYA, TÜRKIYE, 8-12 Kasım 2017
  • Ünsal S., Acar A.C, İtik M., Kabataş A., Gedikli Ö., Turhan K., “Kişiselleştirilmiş Tıp Uygulamaları ve Bir Örnek”, Tıp Bilişiminde Yenilikler Sempozyumu, 2017 –Ankara.
  • Turhan K., Kurt B., Ünsal Ü., “Küçük Hücreli Dışı Akciğer Kanseri için Cisplatin Tabanlı İlaç Direnci ile İlişkili Genlerin Yaşam Analizleri”, Tıp Bilişiminde Yenilikler Sempozyumu, 2017 –Ankara.
  • Aydın Kasap Z., Turhan K, Kurt  B. , ”Karar Ağacı ve Naive Bayes ile Malign Plevral Mezotelyoma Tanı Sistemi”, Tıp Bilişiminde Yenilikler Sempozyumu, 2017 –Ankara.
  • Turhan K., Kurt B. , Unsal S., Itik M., Unsal U, “A Method for Exploring Roots of Radiation Resistance in Cancer”, NGS Tech & Applications Congress 2017 USA.
  • Unsal S., Acar A., Itik M., Kurt B, Unsal U., Turhan K., “A framework for applying bioinformatics analysis of drug resistance to mathematical tumor models”, NGS Tech & Applications Congress 2017 USA.
  • Kasap B., Unsal S., Kasap Z., Acar A.C.  and Turhan K.,“A Method Proposal for Revealing Epigenetic Immune-Escape Mechanisms Using 450k Methylation Array Data”, HIBIT 2017 KKTC
  • Kurt B, Ünsal S, Buçan Kırkbir İ. and Turhan K., “Survival and Enrichment Analyzes of Cisplatin-Based Drug Resistance-Related Genes for Non-Small Cell Lung Cancer”, HIBIT 2017 KKTC.
  • Toprak U., Ünsal S. and Turhan K. ,“Comparing Survival Times of Lung Squamous Cell Carcinoma Patients from Combined RNA-seq and Methylation Data by Estimating Risk Groups”, HIBIT 2017 KKTC.
  • Buçan Kırkbir İ., Kurt B. and  Turhan K., ” A Computer Aided Diagnosis System for Heart Attack Using Decision Tree”, HIBIT 2017 KKTC.
  • Kurt B.,Unsal U., "Survival Analysis of ERCC1 Biomarker in Platinum-based Therapy for Non-Small Cell Lung Cancer (NSCLC)", 18th National and 1st International Boistatistics Congress, Antalya,TURKEY, 26-30 October 2016.
  • Toprak U., Sucularli C., Turhan K., "Assessment of Classification Methods on Lung Cancer mRNA Expression Dataset", 18th National and 1st International Boistatistics Congress, Antalya,TURKEY, 26-30 October 2016.
  • Aydın Kasap Z., Unsal S., Kasap B., Acar A.C., Turhan K.," Discovery of Tumor Immune Escape Pathways in Non-Small Cell Lung Cancer Using Abberant DNA Methylation Patterns With Signaling Pathway Impact Analysis", 18th National and 1st International Boistatistics Congress, Antalya,TURKEY, 26-30 October 2016.
  • Unsal S., Çakmak İ., Haciislamoglu E., Demir A., Yoney A., Turhan K., "Prediction of Prognosis After Radiotherapy in Non-Small Cell Lung Carcinoma Using SVM", 18th National and 1st International Boistatistics Congress, Antalya,TURKEY, 26-30 October 2016.
  • Turhan K., Unsal S., Acar A.C., "Effects of Methylation Data Normalization Methods on Perturbated Pathway Discovery", 18th National and 1st International Boistatistics Congress, Antalya,TURKEY, 26-30 October 2016.
  • Unsal U., Kurt B., Turhan K., "A Gentle Introduction to Network Biology Analysis Methods", 18th National and 1st International Boistatistics Congress, Antalya,TURKEY, 26-30 October 2016.
  • Aydin Kasap Z., Kurt B., Turhan K., "Yapay Sinir Ağları ile Öğrencilerde Alkol Tüketimi Koruyucu Tanı Sistemi", Yönetim Bilişim Sistemleri Dergisi, cilt.1, no.2148-3752, ss.40-50, 2016
  • Unsal S., Acar A.C., Turhan K., "A DNA Methylation Analysis Pipeline Example" , 9th International Symposium on Health Informatics and Bioinformatics, Muğla, TURKEY 16-17 October 2015.
  • Unsal S., Acar A.C., Itik M., Kabatas A., Gedikli O., Turhan K., "A Personalized Tumor Modeling Framework", 9th International Symposium on Health Informatics and Bioinformatics, Muğla, TURKEY 16-17 October 2015.
  • Toprak U., Unsal S., Turhan K., " Inferring Ancestral History of Somatic Mutations with Bayesian Networks", 9th International Symposium on Health Informatics and Bioinformatics, Muğla, TURKEY 16-17 October 2015.
  • Kurt B., Nabiyev V., Turhan K., "A Novel Automatic Suspicious Mass Regions Identification Using Havrda & Charvat Entropy And Otsu'S N Thresholding" , COMPUTER METHODS AND PROGRAMS IN BIOMEDICINE, 2014
  • Kurt B., Nabiyev V., Turhan K., "Automatic Microcalcification Segmentation Using Rough Entropy And Fuzzy Approach", Information Technology in Bio- and Medical Informatics 2013
  • İtik M., Banks S.P., "Chaos In A Three-Dimensional Cancer Model", INTERNATIONAL JOURNAL OF BIFURCATION AND CHAOS, vol.20, pp.71-79, 2010
  • İtik M., Salamci M.U., Banks S.P., "Sdre Optimal Control Of Drug Administration In Cancer Treatment", TURKISH JOURNAL OF ELECTRICAL ENGINEERING AND COMPUTER SCIENCES, vol.18, pp.715-729, 2010
  • İtik M., Salamci M.U., Banks S.P., "Optimal Control Of Drug Therapy In Cancer Treatment", NONLINEAR ANALYSIS-THEORY METHODS, vol.71, pp.E1473-E1486, 2009